{"id":22,"date":"2017-12-20T14:54:33","date_gmt":"2017-12-20T13:54:33","guid":{"rendered":"http:\/\/meetings.ipk-gatersleben.de\/grc2019-abc\/?page_id=22"},"modified":"2019-03-18T09:48:32","modified_gmt":"2019-03-18T08:48:32","slug":"program","status":"publish","type":"page","link":"https:\/\/meetings.ipk-gatersleben.de\/grc2019-abc\/program\/","title":{"rendered":"Programme"},"content":{"rendered":"

Please find below the preliminary program of the GRC2019 on Applied Bioinformatics in Crops on 18 – 20 March 2019<\/strong> at the Leibniz Institute of Plant Genetics and Crop Plant Research in Gatersleben, Germany.
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Download Abstract Book<\/strong><\/p>\n

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\r\n \r\n <\/i><\/span>\r\n <\/i><\/span>\r\n <\/span>\r\n Monday<\/span>\r\n <\/div>\r\n
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8:15<\/td>\n<\/td>\nTransport to Gatersleben<\/td>\n<\/tr>\n
9:00<\/td>\n9:10<\/td>\nOpening<\/td>\n<\/tr>\n
SESSION 1 \/\/ BREEDING INFORMATICS (Chair: Jochen Reif)<\/span><\/th>\n<\/tr>\n
9:10<\/td>\n9:50<\/td>\nKeynote Lecture - Kelly Robbins<\/a> (Cornell University, Ithaca, NY, USA):
\nTechnology Driven Crop Improvement for Africa and South Asia<\/em><\/td>\n<\/tr>\n
9:50<\/td>\n10:30<\/td>\nKeynote Lecture - Anne-Fran\u00e7oise Adam-Blondon<\/a> (Universit\u00e9 Paris-Saclay, Versailles, FR): Developing Infrastructures for FAIR data in plant biology<\/em><\/td>\n<\/tr>\n
10:30<\/td>\n11:00<\/td>\nCoffee Break & Posters<\/td>\n<\/tr>\n
11:00<\/td>\n11:20<\/td>\nCopetti, Dario (Molecular Plant Breeding - ETH Zurich, CH): A Phased Diploid Genome Assembly of Italian Ryegrass <\/em><\/td>\n<\/tr>\n
11:20<\/td>\n11:40<\/td>\nFrommer, Bianca (Bielefeld University, DE): Targeting Haplotype Phasing: Assembling a Grapevine Rootstock Genome <\/em><\/td>\n<\/tr>\n
11:40<\/td>\n12:00<\/td>\nOrmanbekova, Danara (University of Bologna, IT): Diversity Reduction and Selection Signature in Tetraploid Wheat Germplasm from Wild Emmer to Modern Durum Wheat <\/em><\/td>\n<\/tr>\n
12:00<\/td>\n12:20<\/td>\nKoehl, Karin Iris (MPI of Molecular Plant Physiology, DE): Tools for Drought Tolerance Selection in Potato <\/em><\/td>\n<\/tr>\n
12:20<\/td>\n13:20<\/td>\nLunch Break<\/td>\n<\/tr>\n
13:20<\/td>\n13:40<\/td>\nPick the speakers brain over coffee<\/td>\n<\/tr>\n
13:40<\/td>\n14:00<\/td>\nFornasiero, Alice (Istituto di Genomica Applicata (IGA), IT): Single Primer Enrichment Technology as a Tool for Massive Genotyping: Bridging the Gap Between Arrays and Genotyping-by-sequencing <\/em><\/td>\n<\/tr>\n
14:00<\/td>\n14:20<\/td>\nLee, HueyTyng (Justus Liebig University, DE): Genomic and Epigenomic Patterns in Novel Heterotic Pools of Winter Rapeseed <\/em><\/td>\n<\/tr>\n
14:20<\/td>\n14:40<\/td>\nBeier, Sebastian (IPK Gatersleben, DE): How to combine different molecular Marker Systems in Bread Wheat <\/em><\/td>\n<\/tr>\n
SESSION 2 \/\/ BIODIVERSITY AND INFORMATION SYSTEMS I (Chair: Stephan Weise)<\/span><\/th>\n<\/tr>\n
14:40<\/td>\n15:20<\/td>\nKeynote Lecture - Andrea Br\u00e4utigam<\/a> (Bielefeld University, DE): Comparative Transcriptional Network Analysis between Model Crop and Model Plant Species<\/em><\/td>\n<\/tr>\n
15:20<\/td>\n16:00<\/td>\nKeynote Lecture - Janine Felden<\/a> (MARUM, University of Bremen, DE): GFBio - A FAIR Infrastructure Network to Assist Scientists in Data Management<\/em><\/td>\n<\/tr>\n
16:00<\/td>\n16:30<\/td>\nCoffee Break & Posters<\/td>\n<\/tr>\n
16:30<\/td>\n16:50<\/td>\nMayer, Klaus (Helmholtz-Zentrum M\u00fcnchen, DE): Applying Network-based Phylogenomics to Trace the Reticulate Ancestry of Modern Bread Wheats <\/em><\/td>\n<\/tr>\n
16:50<\/td>\n17:10<\/td>\nHarbinson, Jeremy (Wageningen University, NL): Phenotyping and Genes for Photosynthesis <\/em><\/td>\n<\/tr>\n
17:10<\/td>\n17:30<\/td>\nSchmutzer, Thomas (Martin Luther University of Halle-Wittenberg, DE): Kmasker Plants \u2013 The In Silico Assistant To Avoid Drifting On The Slippery Path Of Repetitive Plant Sequences. <\/em><\/td>\n<\/tr>\n
17:30<\/td>\n17:50<\/td>\nSingh, Ajit (Rothamsted Research, UK): Update on KnetMiner FAIR developments <\/em><\/td>\n<\/tr>\n
18:00<\/td>\n20:30<\/td>\nPoster session, Software demos with Snacks & Finger Food<\/td>\n<\/tr>\n
20:30<\/td>\n<\/td>\nTransport to Quedlinburg<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n <\/div>\r\n \r\n
\r\n \r\n <\/i><\/span>\r\n <\/i><\/span>\r\n <\/span>\r\n Tuesday<\/span>\r\n <\/div>\r\n
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8:30<\/td>\n<\/td>\nTransport to Gatersleben<\/td>\n<\/tr>\n
SESSION 3 \/\/ DISTRIBUTED COMPUTING, TOOLS AND INFRASTRUCTURES (Chair: Matthias Lange)<\/span><\/th>\n<\/tr>\n
9:00<\/td>\n9:40<\/td>\nKeynote Lecture - Barend Mons<\/a> (Leiden University, Medical Center, NL): Distributed learning by social machines in crop science, a peek in from health<\/em><\/td>\n<\/tr>\n
9:40<\/td>\n10:20<\/td>\nKeynote Lecture - Bj\u00f6rn Gr\u00fcning<\/a> (University of Freiburg, DE): Integrative Bioinformatics with Galaxy Building Frameworks to Serve the 21th Century Data Science Problems<\/em><\/td>\n<\/tr>\n
10:20<\/td>\n11:00<\/td>\nCoffee Break & Posters<\/td>\n<\/tr>\n
11:00<\/td>\n11:20<\/td>\nMarshall, David (James Hutton Institute & Scotlands Rural College (SRUC), UK): Software Development for Applied Crop Bioinformatics <\/em><\/td>\n<\/tr>\n
11:20<\/td>\n11:40<\/td>\nKeilwagen, Jens (Julius K\u00fchn-Institut (JKI), DE): Combining RNA-seq Data and Homology-based Gene Prediction <\/em><\/td>\n<\/tr>\n
11:40<\/td>\n12:00<\/td>\nArend, Daniel (IPK Gatersleben, DE): From FAIRer Data Do Faster Discovery \u2013 A Comprehensive Infrastructure To Serve Plant Phenomic Research Data <\/em><\/td>\n<\/tr>\n
12:00<\/td>\n12:20<\/td>\nGrehl, Claudius (Martin-Luther University Halle-Wittenberg, DE): Detecting Food Fraud by Means of DNA Methylation <\/em><\/td>\n<\/tr>\n
12:20<\/td>\n13:20<\/td>\nLunch Break<\/td>\n<\/tr>\n
13:20<\/td>\n13:40<\/td>\nPick the speakers brain over coffee<\/td>\n<\/tr>\n
SESSION 4 \/\/ IMAGE-BASED DATA ANALYSES AND DATA VISUALIZATION (Chair: Astrid Junker)<\/span><\/th>\n<\/tr>\n
13:40<\/td>\n14:20<\/td>\nKeynote Lecture - Malia Gehan<\/a> (Donald Danforth Plant Science Center, USA): PlantCV 3.0: Open-Source High-throughput Image Analysis Across Platforms<\/em><\/td>\n<\/tr>\n
14:20<\/td>\n15:00<\/td>\nKeynote Lecture - Sotirios Tsaftaris<\/a> (University of Edinburgh, Alan Turing Institute, UK): Machine learning in plant phenotyping: Doing more with less<\/em><\/td>\n<\/tr>\n
15:00<\/td>\n15:20<\/td>\nGladilin, Evgeny (IPK Gatersleben, DE): Automated Co-registration of Multi-modal Plant Images in Context of High-throughput Data Analysis <\/em><\/td>\n<\/tr>\n
15:20<\/td>\n15:40<\/td>\nRamirez Gonzalez, Ricardo Humberto (John Innes Centre, UK): Expression-bias Visualisation in Polyploid Wheat. <\/em><\/td>\n<\/tr>\n
15:40<\/td>\n16:10<\/td>\nCoffee Break & Posters<\/td>\n<\/tr>\n
SESSION 2 \/\/ BIODIVERSITY AND INFORMATION SYSTEMS II (Chair: Martin Marscher)<\/span><\/th>\n<\/tr>\n
16:10<\/td>\n16:30<\/td>\nGhosh, Sreya (John Innes Centre, UK): Exploring Leaf Rust Resistance In Aegilops Tauschii Using Association Genetics Coupled With Resistance Gene Sequence Capture <\/em><\/td>\n<\/tr>\n
16:30<\/td>\n16:50<\/td>\nGundlach, Heidrun (Helmholtz Center Munich, DE): Transposons as Agents of Diversity <\/em><\/td>\n<\/tr>\n
17:00<\/td>\n<\/td>\nTransport to Quedlinburg<\/td>\n<\/tr>\n
18:00<\/td>\n<\/td>\nGuided City Tour in Quedlinburg<\/td>\n<\/tr>\n
19:00<\/td>\n<\/td>\nConference Dinner in Quedlinburg<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n <\/div>\r\n \r\n
\r\n \r\n <\/i><\/span>\r\n <\/i><\/span>\r\n <\/span>\r\n Wednesday<\/span>\r\n <\/div>\r\n
\r\n \n\n\n\n\n\n\n\n\n\n\n\n\n
8:30<\/td>\n<\/td>\nTransport to Gatersleben<\/td>\n<\/tr>\n
SESSION 5 \/\/ SYSTEMS BIOLOGY AND MODELING (Chair: Uwe Scholz)<\/span><\/th>\n<\/tr>\n
9:00<\/td>\n9:40<\/td>\nKeynote Lecture - Martin Mascher<\/a> (Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, DE): TRITEX: chromosome-scale sequence assembly of Triticeae genomes with open-source tools<\/em><\/td>\n<\/tr>\n
9:40<\/td>\n10:20<\/td>\nKeynote Lecture - Zoran Nikoloski<\/a> (University of Potsdam, DE): Integration of Metabolomics Data in Large-Scale Metabolic Models<\/em><\/td>\n<\/tr>\n
10:20<\/td>\n11:00<\/td>\nCoffee Break & Posters<\/td>\n<\/tr>\n
11:00<\/td>\n11:20<\/td>\nS. C\u00e2mara, Amanda (IPK Gatersleben, DE): Polymer Simulations To Understand The Structure And Dynamics Of Mitotic Barley Chromosomes <\/em><\/td>\n<\/tr>\n
11:20<\/td>\n11:40<\/td>\nSzymanski, Jedrzej Jakub (IPK Gatersleben, DE): Transferring Quality Traits Between Domesticated Plants and their Wild Ancestors <\/em><\/td>\n<\/tr>\n
11:40<\/td>\n12:00<\/td>\nSamuel Seaver (Argonne National Laboratory, US): Plant Informatics in DOE Systems Biology KnowledgeBase <\/em><\/td>\n<\/tr>\n
12:00<\/td>\n12:20<\/td>\nClosing<\/td>\n<\/tr>\n
12:20<\/td>\n13:15<\/td>\nLunch Break<\/td>\n<\/tr>\n
13:15<\/td>\n13:45<\/td>\nPick the speakers brain over coffee<\/td>\n<\/tr>\n<\/tbody>\n<\/table>\n <\/div>\r\n <\/div>\r\n\r\n\r\n\r\n <\/div>\n

Satellite Events<\/strong><\/p>\n

The International Spring School „Computational Biology Starter“<\/a> is a de.NBI training course organized by IPK-Postdoc Board that aims to teach basic bioinformatic and computational biology skills in hands-on lectures to ease the start into big data analysis in life science, particular plant science. The Spring School will start directly after the #GRC2019 from 20 – 22 March 2019.<\/p>\n","protected":false},"excerpt":{"rendered":"

Please find below the preliminary program of the GRC2019 on Applied Bioinformatics in Crops on 18 – 20 March 2019 at the Leibniz Institute of Plant Genetics and Crop Plant Research in Gatersleben, Germany. Download Abstract Book Satellite Events The International Spring School „Computational Biology Starter“ is a de.NBI training course organized by IPK-Postdoc Board weiterlesen…<\/a><\/p>\n","protected":false},"author":5,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"ngg_post_thumbnail":0,"footnotes":""},"class_list":["post-22","page","type-page","status-publish","hentry"],"yoast_head":"\nProgram - GRC2019 on Applied Bioinformatics in Crops<\/title>\n<meta name=\"description\" content=\"Progam of the GRC2019 on Applied Bioinformatics in Crops at the IPK Gatersleben\/Germany from 18 - 20 March, 2019\" \/>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/meetings.ipk-gatersleben.de\/grc2019-abc\/program\/\" \/>\n<meta property=\"og:locale\" content=\"de_DE\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Progam of the GRC2019 on Applied Bioinformatics in Crops\" \/>\n<meta property=\"og:description\" content=\"Progam of the GRC2019 on Applied Bioinformatics in Crops at the IPK Gatersleben\/Germany from 18 - 20 March, 2019\" \/>\n<meta property=\"og:url\" content=\"https:\/\/meetings.ipk-gatersleben.de\/grc2019-abc\/program\/\" \/>\n<meta property=\"og:site_name\" content=\"15. 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